Get optimal k value from cNMF results
Usage
getOptimalK(x, name = "cNMF")
Arguments
- x
A SingleCellExperiment object with cNMF results
- name
Character, name of the cNMF result (default "cNMF")
Value
Integer, optimal k value
Examples
# sce <- runConsensusNMF(sce, k_range = 5:10)
# k_opt <- getOptimalK(sce)