Extract NMF basis matrix from SingleCellExperiment object
Usage
getBasis(x, name = "NMF")
Arguments
- x
A SingleCellExperiment object with NMF results
- name
Character, name of the NMF result to extract (default "NMF")
Value
Matrix with features x factors (basis matrix)
Examples
# sce <- runNMFscape(sce, k = 10)
# basis <- getBasis(sce)