spatialscape thumbnails
Re-render thumbnail.png for the dataset and for each sample.
One section is drawn from the bundle's own coordinates, colored by the default annotation (or the first categorical field the sample carries). build runs this automatically.
Usage
bash
spatialscape thumbnails <OUT> [OPTIONS]Arguments
| Argument | Type | Default | Description |
|---|---|---|---|
OUT | path | required | Bundle directory. |
Options
| Option | Type | Default | Description |
|---|---|---|---|
--hero | text | — | Sample shown on the dataset thumbnail. Default: thumbnail_sample from the yaml, else the first spatial sample in layout order. |
--no-per-sample | flag | off | Skip the per-sample thumbnails. |
Examples
Lead with a particular section
bash
spatialscape thumbnails bundles/dlpfc --hero vis_Br8325